Data: AMR genes identified in sequenced isolates (excluding QRDR mutations)

Identified AMR genes using ARIBA and the SRST database. See manuscript for details

btESBL_amrgenes

Format

A tidy data frame with 10822 rows and 3 variables:

lane

Unique sample-sequencing run ID

ref_seq

Identified AMR gene sequence

genus

Genus of sample (E. coli or K. pneumioniae complex)